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HEPES Buffer

Quick Facts

FeatureInformation
Supplement TypeBiological buffer
Full Name4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid
AbbreviationHEPES
Molecular FormulaC₈H₁₈N₂O₄S
Molecular Weight238.30 g/mol
Effective Buffering RangepH 6.8-8.2
Optimal Buffering RangepH 7.2-7.6
Typical Stock Solution1 M
Typical Working Concentration10-25 mM

Overview

HEPES is a zwitterionic biological buffer widely used in mammalian cell culture to stabilize physiological pH independently of the bicarbonate/CO₂ buffering system. It is particularly valuable during procedures performed outside a CO₂ incubator, where conventional bicarbonate-buffered media rapidly become alkaline due to CO₂ loss.

HEPES is commonly incorporated into media used for live-cell imaging, flow cytometry, cell sorting, electrophysiology, transfection, and prolonged sample handling.

Biological Role

HEPES maintains extracellular pH, helping preserve:

  • Enzyme activity
  • Membrane integrity
  • Protein stability
  • Cellular metabolism
  • Cell viability during handling

Unlike nutrients or growth supplements, HEPES functions solely as a buffering agent.

Mechanism of Action

HEPES acts as a zwitterionic buffer by reversibly binding or releasing hydrogen ions (H⁺), thereby resisting rapid pH fluctuations.

This buffering capacity is especially important when cultures are exposed to atmospheric air outside a CO₂ incubator.

Typical Applications

HEPES is commonly used for:

  • Live-cell imaging
  • Fluorescence microscopy
  • Time-lapse microscopy
  • Flow cytometry
  • Fluorescence-activated cell sorting (FACS)
  • Electrophysiology
  • Cell transport
  • Stem cell manipulation
  • Primary cell handling

Recommended Use

ParameterRecommendation
Stock Solution1 M
Working Concentration10-25 mM
AdditionUse only if the basal medium does not already contain HEPES

Many commercial formulations of DMEM, DMEM/F-12, RPMI-1640, IMDM, Neurobasal, and Williams' E are available with pre-added HEPES.

Advantages

  • Stabilizes physiological pH outside CO₂ incubators
  • Improves cell viability during prolonged handling
  • Compatible with most mammalian culture media
  • Particularly useful for microscopy and flow cytometry
  • Low cytotoxicity at recommended concentrations

Limitations

  • Does not replace bicarbonate buffering for routine long-term culture
  • Provides no nutritional value
  • High concentrations may influence certain experimental systems
  • Can generate reactive oxygen species during prolonged exposure to intense UV or blue light during fluorescence microscopy

Comparison with Related Buffers

Buffer SystemPrimary Use
HEPESCO₂-independent pH stabilization during handling and imaging
Sodium BicarbonatePrimary buffering system for routine incubator culture
Leibovitz's L-15Complete CO₂-independent basal medium with an alternative buffering system

References

  • Good NE et al. Hydrogen ion buffers for biological research. Biochemistry (1966).
  • Freshney RI. Culture of Animal Cells: A Manual of Basic Technique and Specialized Applications.
  • Gibco™ HEPES Buffer Product Information.
  • Thermo Fisher Scientific Cell Culture Handbook.
  • ATCC Animal Cell Culture Guide.